rfhg_101438.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4041353,EH38E2597734) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 26163 |
|---|---|
| Nearest PromoterID: | NM_002770 |
| Entrez ID: | 5645 |
| Nearest Unigene: | Hs.449281 |
| Nearest Refseq: | NM_002770 |
| Nearest Ensembl: | ENSG00000275896 |
| Gene Name: | T cell receptor beta joining 2-5 |
| Gene Alias: | TRY2|TRY8|TRYP2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095238 |
| GC%: | 0.697674 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "AF088780:68 AB076757:85 AB076788:85 AB076789:85 AB076791:86 D50767:86 AB076765:87 AB076792:88 M28597:88 AF088742:88 D50773:-99 M28598:-101 KM004774:-109 L77708:-112 LP896471:-114 X04923:-142 Z48302:-171 AF327021:-250 M12424:-252 AF045804:-256 AJ305364:-256 AB076773:-259 AF045808:-259 AJ305361:-259 Z77836:-259 AF088767:-260 AF045807:-260 AJ305360:-260 JQ778260:-260 D32019:-261 D50743:-261 AF179357:-263 D32038:-263 AF088702:-263 AB076761:-264 AB076794:-264 AF088703:-264 AF045802:-264 AJ305362:-264 D50769:-265 JQ778264:-265 X01410:-273 AB044135:300 AF088694:301 AF088699:302 AF088748:302 AF117139:303 D50742:303 AF088766:303 AB044113:304 AB076759:304 L77720:304 L77724:304 S80931:304 D50746:304 AF088740:304 U07134:305 D50745:305 AF088698:305 AF088755:305 AF088776:305 AF088797:305 D50763:305 M12426:305 D50752:306 AF088697:306 AF088746:306 AF088764:306 D50748:307 AF088719:307 AF088733:307 AF088744:307 AF088745:307 AF088774:307 D50772:307 AF088696:308 AF088738:308 AF088787:308 AF088791:308 D50751:309 AF088695:309 AF088758:309 D21848:309 AF088772:310 AF088795:310 LT626065:-433" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.