rfhg_101494.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101494.1
Species:human
Chr:chr7
Start:142813394
End:142813400
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4041393,EH38E2597774)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000417977.2:0
GeneID:
HGNC/MGI_ID:HGNC:12214
UniProt_ID:A0A0K0K1B3
Nearer transcript ids and distances:
  • AB305941:5
  • AB977529:12
  • AB977740:12
  • AB977638:12
  • AB305833:-15
  • AB305947:18
  • AB978162:-19
  • AB977636:-25
  • AB360843:28
  • AB977949:-32
  • AB305992:38
  • AB305842:-51
  • AB306147:-92
  • AB305801:-94
  • AB977671:-94
  • D13086:104
  • AB305914:105
  • L06893:107
  • AB305997:111
  • AB306228:117
  • AB305955:125
view more...
Gene_name:T cell receptor beta variable 30
Gene_symbol:TRBV30
Gene_synonyms:TCRBV20S1A1N2 TCRBV30S1
Gene_source:HGNC:12214



TATA-Box annotation


Distance to TSS:-41617
Nearest PromoterID:NM_001280794
Entrez ID:2051
Nearest Unigene:Hs.380089
Nearest Refseq:NM_004445
Nearest Ensembl:ENSG00000106123
Gene Name:T cell receptor beta variable 30
Gene Alias:HEP
Gene Type:protein-coding
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "AB305941:5 AB977529:12 AB977740:12 AB977638:12 AB305833:-15 AB305947:18 AB978162:-19 AB977636:-25 AB360843:28 AB977949:-32 AB305992:38 AB305842:-51 AB306147:-92 AB305801:-94 AB977671:-94 D13086:104 AB305914:105 L06893:107 AB305997:111 AB306228:117 AB305955:125" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.