rfhg_101780.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_101780.1
Species:human
Chr:chr7
Start:148987184
End:148987261
Strand:-
Source datasetsPRJNA548673
ProtocolReCappable-seq
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4044995,EH38E2599786)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000364228.1:0
GeneID:6084
HGNC/MGI_ID:HGNC:10242
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:RNA, Ro60-associated Y1
    Gene_symbol:RNY1
    Gene_synonyms:hY1
    Gene_source:HGNC:10242



    TATA-Box annotation


    Distance to TSS:26
    Nearest PromoterID:NR_004391
    Entrez ID:6084
    Nearest Unigene:
    Nearest Refseq:NR_004391
    Nearest Ensembl:ENSG00000201098
    Gene Name:RNA, Ro60-associated Y1
    Gene Alias:HY1|Y1
    Gene Type:ncRNA
    CpG%:0.025974
    GC%:0.435897
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.