rfhg_102579.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_102579.1
Species:human
Chr:chr7
Start:155509861
End:155509879
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4050407,EH38E2603454)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001369821.1:0
NM_001369820.1:0
NM_001369818.2:0
NR_163166.1:0
NR_163167.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000682997.1:-283
  • NM_001369816.1:-283
  • NM_001369815.1:-283
  • NR_163165.1:-283
  • NR_163162.1:-283
  • NR_163163.1:-283
  • NR_163164.1:-283
  • NR_163161.1:-283
  • NR_163160.1:-283
  • NR_163159.1:-283
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NR_163166
Entrez ID:285888
Nearest Unigene:Hs.146751
Nearest Refseq:NM_001103176
Nearest Ensembl:ENSG00000146910
Gene Name:
Gene Alias:-
Gene Type:protein-coding
CpG%:0.055556
GC%:0.684211
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):