rfhg_10298.1

Basic information about the TSS

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TSS ID: rfhg_10298.1 TSS ID(Version3): hg_4366.1 hg_4365.1 Species: human Chr: chr1		Start: 108746630 End: 108746763 Strand: +
Source datasets	FANTOM5|EPD|DBTSS|ENCODE|PRJNA615891|PRJNA401781 |PRJNA548673|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|TSS_database|TSS-seq|TIF-seq2|ReCappable-seq|NETCAGE |RAMPAGE|SLIC_CAGE|oligo_capping|C1CAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2208224,EH38E1374282)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000483586.5:0 ENST00000370008.4:0 ENST00000469338.1:0 AK290134:0 AK312910:0 AK291322:0 AK223170:0 D63506:0 BC047764:0 BC028028:0 BC038099:0 AF032922:0 CU690494:0 GeneID: 6814 HGNC/MGI_ID: HGNC:11446 UniProt_ID: O00186 Nearer transcript ids and distances:

Gene_name: syntaxin binding protein 3 Gene_symbol: STXBP3 Gene_synonyms: UNC-18C Gene_source: HGNC:11446

TATA-Box annotation

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Distance to TSS:	22
Nearest PromoterID:	NM_007269
Entrez ID:	6814
Nearest Unigene:	Hs.530436
Nearest Refseq:	NM_007269
Nearest Ensembl:	ENSG00000116266
Gene Name:	syntaxin binding protein 3
Gene Alias:	MUNC18-3|MUNC18C|PSP|UNC-18C
Gene Type:	protein-coding
CpG%:	0.067669
GC%:	0.694030
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.