rfhg_103980.1

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Basic information about the TSS


TSS ID:rfhg_103980.1
TSS ID(Version3):hg_87571.1
hg_87572.1
Species:human
Chr:chr8
Start:18210102
End:18210153
Strand:+
Source datasetsFANTOM5|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4066733,EH38E2613687)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000307719.9:0
AJ581152:0
BC047666:0
BX647521:0
BC013732:0
AJ581135:0
GeneID:9
HGNC/MGI_ID:HGNC:11048 HGNC:7645
UniProt_ID:P18440
Nearer transcript ids and distances:
  • AJ581151:-321
Gene_name:N-acetyltransferase 1; solute carrier family 6 member 2
Gene_symbol:NAT1 SLC6A2
Gene_synonyms:NET
Gene_source:HGNC:11048 HGNC:7645



TATA-Box annotation


Distance to TSS:18
Nearest PromoterID:NM_001160170
Entrez ID:9
Nearest Unigene:Hs.591847
Nearest Refseq:NM_000662
Nearest Ensembl:ENSG00000171428
Gene Name:N-acetyltransferase 1; solute carrier family 6 member 2
Gene Alias:AAC1|MNAT|NAT-1|NATI
Gene Type:protein-coding
CpG%:0.000000
GC%:0.480769
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.