rfhg_10570.1

Basic information about the TSS

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TSS ID: rfhg_10570.1 TSS ID(Version3): hg_4505.1 Species: human Chr: chr1		Start: 110034606 End: 110034636 Strand: +
Source datasets	FANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA597322|PRJNA401781 |PRJNA548673|PRJNA615891
Protocol	CAGE|TSS_database|NETCAGE|STRIPE-seq|ReCappable-seq |SLIC_CAGE|oligo_capping|TIF-seq2
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2209564,EH38E1375387)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000369795.8:0 ENST00000489059.1:0 ENST00000485775.5:0 BC119814:0 BC121793:0 BC094786:0 AK291059:0 AL834196:0 AB051548:0 GeneID: 85369 HGNC/MGI_ID: HGNC:25916 UniProt_ID: A8K4U4 Q5VSL9 Nearer transcript ids and distances: AB463038:2 KJ895086:2 LF206293:-96 MA441870:-96 view more...

Gene_name: striatin interacting protein 1 Gene_symbol: STRIP1 Gene_synonyms: FAR11A FLJ14743 KIAA1761 Gene_source: HGNC:25916

TATA-Box annotation

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Distance to TSS:	-3
Nearest PromoterID:	NM_033088
Entrez ID:	85369
Nearest Unigene:	Hs.584996
Nearest Refseq:	NM_033088
Nearest Ensembl:	ENSG00000143093
Gene Name:	striatin interacting protein 1
Gene Alias:	FAM40A|FAR11A
Gene Type:	protein-coding
CpG%:	0.033333
GC%:	0.612903
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.