rfhg_105735.1

Basic information about the TSS

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TSS ID: rfhg_105735.1 Species: human Chr: chr8		Start: 37849841 End: 37849889 Strand: -
Source datasets	PRJNA548673|PRJNA615891|PRJDB5282|PRJNA4843412|DRA013844 |PRJNA401781
Protocol	ReCappable-seq|SLIC_CAGE|C1CAGE|NETCAGE|CAGE|RAMPAGE |oligo_capping|TIF-seq2
TSS cluster detected*	10

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D4083345,EH38E2624984)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000220659.11:0 BC010648:0 AK001914:0 AK315420:0 GeneID: 55290 HGNC/MGI_ID: HGNC:1108 HGNC:17298 UniProt_ID: Q9HAW0 Nearer transcript ids and distances: ENST00000520601.5:3 AF206673:-4 AF298153:5 AK294337:-52 KJ894179:58 EU446514:58 AB463449:58 CU679783:58 view more...

Gene_name: BRF2 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 2 Gene_symbol: BRF2 ZFP36L2 Gene_synonyms: BRFU ERF2 FLJ11052 RNF162C TFIIIB50 TIS11D Gene_source: HGNC:1108 HGNC:17298

TATA-Box annotation

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Distance to TSS:	-4
Nearest PromoterID:	NM_018310
Entrez ID:	55290
Nearest Unigene:	Hs.709301
Nearest Refseq:	NM_018310
Nearest Ensembl:	ENSG00000104221
Gene Name:	BRF2 RNA polymerase III transcription initiation factor subunit; ZFP36 ring finger protein like 2
Gene Alias:	BRFU|TFIIIB50
Gene Type:	protein-coding
CpG%:	0.020833
GC%:	0.551020
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.