rfhg_10611.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_10611.1
TSS ID(Version3):hg_13740.1
Species:human
Chr:chr1
Start:110339040
End:110339162
Strand:-
Source datasetsFANTOM5|PRJNA401781|PRJNA597322|PRJNA615891
ProtocolCAGE|RAMPAGE|STRIPE-seq|oligo_capping|SLIC_CAGE
TSS cluster detected*6

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2209900,EH38E1375661)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000449169.1:-9
BC053344:-9
GeneID:440600
HGNC/MGI_ID:HGNC:53636
UniProt_ID:
Nearer transcript ids and distances:
  • LF206291:-53
  • MA441868:-53
  • LF353013:135
  • MA588590:135
  • LF353014:455
  • MA588591:455
view more...
Gene_name:RBM15 antisense RNA 1
Gene_symbol:RBM15-AS1
Gene_synonyms:AS-RBM15
Gene_source:HGNC:53636



TATA-Box annotation


Distance to TSS:70
Nearest PromoterID:NR_036595
Entrez ID:440600
Nearest Unigene:Hs.649375
Nearest Refseq:NR_036595
Nearest Ensembl:ENSG00000227963
Gene Name:RBM15 antisense RNA 1
Gene Alias:AS-RBM15
Gene Type:ncRNA
CpG%:0.040984
GC%:0.512195
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):66(GCTTATAAACCC,+,0.00)



TSS expression

Expression data not found.