rfhg_106555.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_106555.1
Species:human
Chr:chr8
Start:52249478
End:52249498
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D4092017,EH38E2630803)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001352875.2:0
NM_001352878.2:0
NM_001352853.2:0
NM_001352855.2:0
NM_001352854.2:0
NM_001352851.2:0
NM_001352868.2:0
NM_001352852.2:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000518545.5:66
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:9
Nearest PromoterID:NM_001352854
Entrez ID:9705
Nearest Unigene:Hs.655499
Nearest Refseq:NM_014682
Nearest Ensembl:ENSG00000147488
Gene Name:
Gene Alias:NZF-3|NZF3|ZC2H2C3|ZC2HC10|ZNF387
Gene Type:protein-coding
CpG%:0.000000
GC%:0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):