rfhg_106793.1

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Basic information about the TSS


TSS ID:rfhg_106793.1
TSS ID(Version3):hg_88935.1
Species:human
Chr:chr8
Start:56211715
End:56211796
Strand:+
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA401781|PRJDB5282
|PRJNA4843412|DRA013844|PRJNA548673|PRJNA615891|PRJNA597322
ProtocolCAGE|TSS_database|TSS-seq|RAMPAGE|oligo_capping|C1CAGE
|NETCAGE|ReCappable-seq|TIF-seq2|SLIC_CAGE|STRIPE-seq
TSS cluster detected*16

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4094745,EH38E2632474)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000303759.3:0
ENST00000518169.1:0
ENST00000522366.5:0
ENST00000517636.5:0
ENST00000517933.5:0
ENST00000523532.5:0
ENST00000523667.5:0
ENST00000521982.5:0
ENST00000522166.1:0
ENST00000355315.8:0
AK098285:0
AK290088:0
AK095922:0
GeneID:79145
HGNC/MGI_ID:HGNC:28314
UniProt_ID:E5RFN2 E5RII1 E5RJ08 E5RJ15 Q9BUK0
Nearer transcript ids and distances:
  • ENST00000518801.5:2
  • ENST00000523975.5:2
  • AY070434:2
  • ENST00000396723.9:3
  • AK225982:3
  • BC002546:3
  • ENST00000523061.5:12
  • ENST00000521524.5:14
  • ENST00000521831.5:-29
view more...
Gene_name:coiled-coil-helix-coiled-coil-helix domain containing 7
Gene_symbol:CHCHD7
Gene_synonyms:COX23 MGC2217
Gene_source:HGNC:28314



TATA-Box annotation


Distance to TSS:-34
Nearest PromoterID:NM_001011671
Entrez ID:79145
Nearest Unigene:Hs.436913
Nearest Refseq:NM_024300
Nearest Ensembl:ENSG00000170791
Gene Name:coiled-coil-helix-coiled-coil-helix domain containing 7
Gene Alias:COX23
Gene Type:protein-coding
CpG%:0.086420
GC%:0.658537
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.