rfhg_107453.1

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Basic information about the TSS


TSS ID:rfhg_107453.1
TSS ID(Version3):hg_93429.1
hg_242897.1
Species:human
Chr:chr8
Start:66925490
End:66925547
Strand:-
Source datasetsFANTOM5|DBTSS|DRA000914|ENCODE|PRJNA548673|PRJNA615891
|PRJNA597322|PRJNA401781|PRJNA4843412|DRA013844
ProtocolCAGE|TSS-seq|ReCappable-seq|TIF-seq2|SLIC_CAGE|STRIPE-seq
|RAMPAGE|oligo_capping|NETCAGE
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4102564,EH38E2637462)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000520348.5:0
ENST00000521399.5:0
ENST00000521127.1:0
AY264285:0
AK057116:0
GeneID:641638
HGNC/MGI_ID:HGNC:32965
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000520944.5:-49
Gene_name:small nucleolar RNA host gene 6
Gene_symbol:SNHG6
Gene_synonyms:HBII-276HG NCRNA00058 U87HG
Gene_source:HGNC:32965



TATA-Box annotation


Distance to TSS:23
Nearest PromoterID:NR_152599
Entrez ID:641638
Nearest Unigene:Hs.372680
Nearest Refseq:NR_002599
Nearest Ensembl:ENSG00000245910
Gene Name:small nucleolar RNA host gene 6
Gene Alias:HBII-276HG|NCRNA00058|U87HG
Gene Type:ncRNA
CpG%:0.140351
GC%:0.620690
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.