rfhg_108494.1

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Basic information about the TSS


TSS ID:rfhg_108494.1
Species:human
Chr:chr8
Start:88542681
End:88542691
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D4116774,EH38E2645807)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000670095.1:-15
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000659668.1:22
  • ENST00000653184.1:34
  • ENST00000649573.1:37
  • ENST00000518631.1:-64
  • ENST00000520312.1:-77
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-215203
Nearest PromoterID:NM_005941
Entrez ID:4325
Nearest Unigene:Hs.492187
Nearest Refseq:NM_005941
Nearest Ensembl:ENSG00000156103
Gene Name:
Gene Alias:C8orf57|MMP-X2|MT-MMP2|MT-MMP3|MT3-MMP
Gene Type:protein-coding
CpG%:0.000000
GC%:0.363636
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):