rfhg_112171.1

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Basic information about the TSS


TSS ID:rfhg_112171.1
Species:human
Chr:chr8
Start:142198340
End:142198360
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D4160145,EH38E2674259)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000517704.1:0
BC008253:0
GeneID:619434
HGNC/MGI_ID:HGNC:32028
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:long intergenic non-protein coding RNA 51
    Gene_symbol:LINC00051
    Gene_synonyms:
    Gene_source:HGNC:32028



    TATA-Box annotation


    Distance to TSS:-6
    Nearest PromoterID:NR_024378
    Entrez ID:619434
    Nearest Unigene:Hs.393308
    Nearest Refseq:NR_024378
    Nearest Ensembl:ENSG00000254008
    Gene Name:long intergenic non-protein coding RNA 51
    Gene Alias:C8orf43|NCRNA00051
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.714286
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.