rfhg_113120.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_113120.1
TSS ID(Version3):hg_99811.1
hg_99812.1
Species:human
Chr:chr9
Start:4741172
End:4741234
Strand:-
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJNA597322|PRJNA401781
|PRJNA615891|PRJNA548673
ProtocolCAGE|NETCAGE|STRIPE-seq|SLIC_CAGE|ReCappable-seq
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4167399,EH38E2679365)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000381809.8:0
AK001553:0
AK001951:0
AK298200:0
GeneID:50808
HGNC/MGI_ID:HGNC:17376 HGNC:363
UniProt_ID:Q9UIJ7
Nearer transcript ids and distances:
  • BC013771:29
  • AK027534:71
  • DQ891660:83
  • DQ894847:83
  • AB021870:85
  • AF100785:103
  • AF086913:103
view more...
Gene_name:adenylate kinase 3; adenylate kinase 4
Gene_symbol:AK3 AK4
Gene_synonyms:AKL3L1
Gene_source:HGNC:17376 HGNC:363



TATA-Box annotation


Distance to TSS:-1
Nearest PromoterID:NM_016282
Entrez ID:50808
Nearest Unigene:Hs.732022
Nearest Refseq:NM_016282
Nearest Ensembl:ENSG00000147853
Gene Name:adenylate kinase 3; adenylate kinase 4
Gene Alias:AK3L1|AK6|AKL3L|AKL3L1|FIX
Gene Type:protein-coding
CpG%:0.129032
GC%:0.698413
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.