rfhg_114625.1

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Basic information about the TSS


TSS ID:rfhg_114625.1
TSS ID(Version3):hg_231441.1
hg_96534.1
Species:human
Chr:chr9
Start:34665599
End:34665654
Strand:+
Source datasetsFANTOM5|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
ProtocolCAGE|NETCAGE|ReCappable-seq|RAMPAGE|oligo_capping
TSS cluster detected*8

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4187246,EH38E2691380)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000654838.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000434627.1:11
  • AK125920:-103
  • LF354301:203
  • MA589878:203
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:419
Nearest PromoterID:NM_001320038
Entrez ID:730098
Nearest Unigene:Hs.459590
Nearest Refseq:NM_001320037
Nearest Ensembl:ENSG00000187186
Gene Name:
Gene Alias:-
Gene Type:protein-coding
CpG%:0.072727
GC%:0.660714
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):