rfhg_114786.1

Basic information about the TSS

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TSS ID: rfhg_114786.1 Species: human Chr: chr9		Start: 35665169 End: 35665229 Strand: -
Source datasets	PRJNA4843412|DRA013844|PRJNA615891|PRJNA548673|PRJNA401781
Protocol	NETCAGE|CAGE|TIF-seq2|ReCappable-seq|SLIC_CAGE|RAMPAGE |oligo_capping
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D4188028,EH38E2691938)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Transcript_name: ENST00000475323.5 ENST00000378387.4 ENST00000490970.5 AK027548 AK225501 AK225529 BC033666 AK303513 Distance: 0 GeneID: 84904 HGNC/MGI_ID: HGNC:25909 UniProt_ID: B4E0T1 Q8N4T4

Gene_name: ARHGEF39 Gene_symbol: ARHGEF39 Gene_synonyms: FLJ14642 Gene_source: HGNC:25909

TATA-Box annotation

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Distance to TSS:	-4
Nearest PromoterID:	NM_032818
Entrez ID:	84904
Nearest Unigene:	Hs.534579
Nearest Refseq:	NM_032818
Nearest Ensembl:	ENSG00000137135
Gene Name:	ARHGEF39
Gene Alias:	C9orf100
Gene Description:	Rho guanine nucleotide exchange factor 39
Gene Type:	protein-coding
CpG%:	0.083333
GC%:	0.622951
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.