rfhg_115296.1

Basic information about the TSS

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TSS ID: rfhg_115296.1 Species: human Chr: chr9		Start: 69035730 End: 69035814 Strand: +
Source datasets	PRJNA4843412|DRA013844|PRJNA597322|PRJNA401781|PRJNA548673 |PRJNA615891
Protocol	NETCAGE|CAGE|STRIPE-seq|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*	8

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D4192479,EH38E2694914)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000644653.1:0 ENST00000484259.3:0 ENST00000396366.6:0 BC048097:0 BC023633:0 CU690546:0 HQ447980:0 KR710950:0 KR710951:0 KU178079:0 KU178080:0 GeneID: 2395 HGNC/MGI_ID: HGNC:3951 UniProt_ID: A0A0S2Z3G4 A0A0S2Z3Q8 Q16595 Nearer transcript ids and distances: ENST00000377270.8:219 ENST00000498653.5:347 AK308620:347 U43747:-471 view more...

Gene_name: frataxin Gene_symbol: FXN Gene_synonyms: CyaY FA FARR X25 Gene_source: HGNC:3951

TATA-Box annotation

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Distance to TSS:	20
Nearest PromoterID:	NM_181425
Entrez ID:	2395
Nearest Unigene:	Hs.20685
Nearest Refseq:	NM_000144
Nearest Ensembl:	ENSG00000165060
Gene Name:	frataxin
Gene Alias:	CyaY|FA|FARR|FRDA|X25
Gene Type:	protein-coding
CpG%:	0.142857
GC%:	0.764706
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.