rfhg_11544.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_11544.1
TSS ID(Version3):hg_14102.1
Species:human
Chr:chr1
Start:120069648
End:120069675
Strand:-
Source datasetsFANTOM5|PRJNA615891|PRJNA4843412|DRA013844
ProtocolCAGE|SLIC_CAGE|NETCAGE
TSS cluster detected*4

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000256646.7:0
BC071562:0
GeneID:4853
HGNC/MGI_ID:HGNC:7882
UniProt_ID:Q04721 Q6IQ50
Nearer transcript ids and distances:
  • ENST00000479412.2:22
  • ENST00000652737.1:22
  • AK307843:24
  • ENST00000652302.1:32
  • AF315356:230
  • AF308601:242
  • KJ901607:242
  • ENST00000651371.1:285
view more...
Gene_name:notch receptor 2
Gene_symbol:NOTCH2
Gene_synonyms:
Gene_source:HGNC:7882



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_024408
Entrez ID:4853
Nearest Unigene:Hs.487360
Nearest Refseq:NM_024408
Nearest Ensembl:ENSG00000134250
Gene Name:notch receptor 2
Gene Alias:AGS2|HJCYS|hN2
Gene Type:protein-coding
CpG%:0.074074
GC%:0.607143
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.