rfhg_117065.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_117065.1
TSS ID(Version3):hg_101582.1
hg_101583.1
hg_101584.1
Species:human
Chr:chr9
Start:95875454
End:95875544
Strand:-
Source datasetsFANTOM5|PRJNA401781|PRJNA548673|DRA013844|PRJNA615891
ProtocolCAGE|oligo_capping|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*8

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4214909,EH38E2710001)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Transcript_name:ENST00000433656.2 ENST00000671508.1 AF170307
Distance:0
GeneID:100128782
HGNC/MGI_ID:HGNC:27858
UniProt_ID:Q8WZ93
Gene_name:ERCC6L2
Gene_symbol:ERCC6L2-AS1
Gene_synonyms:
Gene_source:HGNC:27858



TATA-Box annotation


Distance to TSS:-192
Nearest PromoterID:NM_020207
Entrez ID:375748
Nearest Unigene:Hs.432364
Nearest Refseq:NM_020207
Nearest Ensembl:ENSG00000182150
Gene Name:ERCC6L2
Gene Alias:BMFS2|C9orf102|RAD26L|SR278
Gene Description:ERCC excision repair 6 like 2
Gene Type:protein-coding
CpG%:0.100000
GC%:0.626374
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.