rfhg_117527.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_117527.1
Species:human
Chr:chr9
Start:101398842
End:101398923
Strand:+
Source datasetsPRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
ProtocolNETCAGE|CAGE|ReCappable-seq
TSS cluster detected*5

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4219556,EH38E2713234)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000339664.7:0
ENST00000374861.7:0
AK290163:0
AK313655:0
AK308935:0
BC065718:0
GeneID:7743
HGNC/MGI_ID:HGNC:12980
UniProt_ID:B2R962 O75820
Nearer transcript ids and distances:
  • BC092425:30
  • ENST00000259395.4:105
  • AF025770:105
  • U75454:105
  • U95992:105
  • ENST00000615466.1:166
  • BC126120:166
  • BC143876:166
  • BC143877:166
  • KJ901845:234
view more...
Gene_name:zinc finger protein 189
Gene_symbol:ZNF189
Gene_synonyms:
Gene_source:HGNC:12980



TATA-Box annotation


Distance to TSS:28
Nearest PromoterID:NM_001278240
Entrez ID:7743
Nearest Unigene:Hs.50123
Nearest Refseq:NM_003452
Nearest Ensembl:ENSG00000136870
Gene Name:zinc finger protein 189
Gene Alias:-
Gene Type:protein-coding
CpG%:0.061728
GC%:0.658537
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.