rfhg_117608.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D4220805,EH38E2713757) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20 |
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| Nearest PromoterID: | NM_001042550 |
| Entrez ID: | 10592 |
| Nearest Unigene: | Hs.119023 |
| Nearest Refseq: | NM_006444 |
| Nearest Ensembl: | ENSG00000136824 |
| Gene Name: | |
| Gene Alias: | CAP-E|CAPE|SMC-2|SMC2L1 |
| Gene Type: | protein-coding |
| CpG%: | 0.076923 |
| GC%: | 0.642857 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "BC107891:-63 BC032705:-67 ENST00000374787.7:-77 AK001485:-77 BC071750:-91 BC130385:-227 BC144163:-227 AY739716:-240 AF092563:-315 BC017845:-320 AK292599:-320 AK307752:-327 BC061906:-329 ENST00000374793.8:-332 NM_006444.3:-332 NM_001265602.2:-332 NM_001042551.2:-332 ENST00000440179.5:-345 BC055081:-345 ENST00000286398.11:-381 AL833191:-381" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.