rfhg_11807.1
From referenceTSS
Basic information about the TSS
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Source datasets | FANTOM5|PRJNA548673|PRJNA615891|PRJDB5282|PRJNA4843412 |DRA013844 | |||||||||||||||
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Protocol | CAGE|TIF-seq2|ReCappable-seq|SLIC_CAGE|C1CAGE|NETCAGE | |||||||||||||||
TSS cluster detected* | 8 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D2219454,EH38E1382384) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 34 |
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Nearest PromoterID: | NR_104085 |
Entrez ID: | 101954276 |
Nearest Unigene: | |
Nearest Refseq: | NR_104085 |
Nearest Ensembl: | ENSG00000201558 |
Gene Name: | RNA, variant U1 small nuclear 6 |
Gene Alias: | RNU1-99|vU1.6 |
Gene Type: | snRNA |
CpG%: | 0.028986 |
GC%: | 0.500000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.