rfhg_118077.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_118077.1
Species:human
Chr:chr9
Start:111039029
End:111039032
Strand:-
Source datasetsPRJNA4843412
ProtocolNETCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001387476.1:31
NM_001387470.1:31
NM_001387472.1:31
NM_001387473.1:31
NM_001351398.2:31
NM_001387474.1:31
NM_001351399.2:31
NM_001387475.1:31
NM_001351397.2:31
NM_001387471.1:31
NM_001387520.1:31
NM_001387519.1:31
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK290287:-214
  • NM_001351405.2:289
  • NM_001387477.1:289
  • NM_001387484.1:289
  • NM_001387479.1:289
  • NM_001351401.2:289
  • NM_001351404.2:289
  • NM_001387482.1:289
  • NM_001387483.1:289
  • NM_001351400.2:289
  • NM_001387478.1:289
  • NM_001351402.2:289
  • NM_001387480.1:289
  • NM_001387486.1:289
  • NM_001387481.1:289
  • NM_001351403.2:289
  • NM_001387485.1:289
  • AK298590:328
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-32
Nearest PromoterID:NM_001351398
Entrez ID:1902
Nearest Unigene:Hs.126667
Nearest Refseq:NM_001401
Nearest Ensembl:ENSG00000198121
Gene Name:
Gene Alias:EDG2|GPR26|Gpcr26|LPA1|Mrec1.3|VZG1|edg-2|rec.1.3|vzg-1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.250000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "AK290287:-214 NM_001351405.2:289 NM_001387477.1:289 NM_001387484.1:289 NM_001387479.1:289 NM_001351401.2:289 NM_001351404.2:289 NM_001387482.1:289 NM_001387483.1:289 NM_001351400.2:289 NM_001387478.1:289 NM_001351402.2:289 NM_001387480.1:289 NM_001387486.1:289 NM_001387481.1:289 NM_001351403.2:289 NM_001387485.1:289 AK298590:328" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.