rfhg_118299.1

Basic information about the TSS

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TSS ID: rfhg_118299.1 TSS ID(Version3): hg_98083.1 hg_98084.1 Species: human Chr: chr9		Start: 113275647 End: 113275728 Strand: +
Source datasets	FANTOM5|PRJNA401781|PRJNA548673|PRJNA615891|PRJNA4843412 |DRA013844|PRJDB5282|PRJNA597322
Protocol	CAGE|oligo_capping|ReCappable-seq|SLIC_CAGE|NETCAGE|C1CAGE |RAMPAGE|STRIPE-seq|TIF-seq2
TSS cluster detected*	12

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D4228413,EH38E2719268)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000374198.5:0 AK225056:0 U82756:0 BC007424:0 AF016369:0 AB209797:0 AK313131:0 BC001588:0 GeneID: 9128 HGNC/MGI_ID: HGNC:17349 UniProt_ID: B2R7V4 Q59EL4 Q5T1M7 Nearer transcript ids and distances: ENST00000374199.9:-5 KJ892693:10 KJ901945:10 EU176673:11 EU176331:11 AB590453:15 CR457105:16 AY572489:16 DQ600473:-80 view more...

Gene_name: pre-mRNA processing factor 4 Gene_symbol: PRPF4 Gene_synonyms: HPRP4 HPRP4P PRP4 Prp4p SNRNP60 Gene_source: HGNC:17349

TATA-Box annotation

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Distance to TSS:	53
Nearest PromoterID:	NR_136266
Entrez ID:	9128
Nearest Unigene:	Hs.744014
Nearest Refseq:	NM_004697
Nearest Ensembl:	ENSG00000136875
Gene Name:	pre-mRNA processing factor 4
Gene Alias:	HPRP4|HPRP4P|PRP4|Prp4p|RP70|SNRNP60
Gene Type:	protein-coding
CpG%:	0.111111
GC%:	0.670732
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.