rfhg_119069.1

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Basic information about the TSS


TSS ID:rfhg_119069.1
TSS ID(Version3):hg_98432.1
Species:human
Chr:chr9
Start:122940998
End:122941058
Strand:+
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|PRJNA4843412|DRA013844
|PRJDB5282|PRJNA401781|PRJNA548673|PRJNA615891
ProtocolCAGE|TSS_database|NETCAGE|C1CAGE|RAMPAGE|ReCappable-seq
|SLIC_CAGE
TSS cluster detected*12

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4236729,EH38E2724887)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000459903.5:0
ENST00000317419.7:0
ENST00000373647.9:0
ENST00000402311.5:0
BC020609:0
AK022408:0
BC054492:0
AF161357:0
AJ011679:0
GeneID:23637
HGNC/MGI_ID:HGNC:17155
UniProt_ID:B5MCD9 Q9Y3P9
Nearer transcript ids and distances:
  • ENST00000426918.2:32
  • ENST00000456584.5:-165
  • AK131449:-165
view more...
Gene_name:RAB GTPase activating protein 1
Gene_symbol:RABGAP1
Gene_synonyms:GAPCenA TBC1D11
Gene_source:HGNC:17155



TATA-Box annotation


Distance to TSS:8
Nearest PromoterID:NM_012197
Entrez ID:23637
Nearest Unigene:Hs.271341
Nearest Refseq:NM_012197
Nearest Ensembl:ENSG00000011454
Gene Name:RAB GTPase activating protein 1
Gene Alias:GAPCENA|TBC1D11
Gene Type:protein-coding
CpG%:0.116667
GC%:0.819672
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.