rfhg_119832.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_119832.1
Species:human
Chr:chr9
Start:128456950
End:128456970
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4242845,EH38E2729618)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_153437.3:-14
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000470061.5:15
  • ENST00000372791.7:-31
  • AF012549:57
  • AY319414:242
  • EU832188:434
  • BC091500:-437
  • ENST00000432065.6:-484
  • ENST00000421776.6:-500
  • AK308278:-500
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_153437
Entrez ID:4957
Nearest Unigene:Hs.129055
Nearest Refseq:NM_002540
Nearest Ensembl:ENSG00000136811
Gene Name:
Gene Alias:CT134|ODF2/1|ODF2/2|ODF84
Gene Type:protein-coding
CpG%:0.100000
GC%:0.809524
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):