rfhg_120096.1

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Basic information about the TSS


TSS ID:rfhg_120096.1
Species:human
Chr:chr9
Start:129834703
End:129834711
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D4244454,EH38E2730893)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF370363:-30
MA605940:-30
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000461762.5:156
  • AK097577:156
  • LF346690:-480
  • MA582267:-480
  • LF207946:-497
  • MA443523:-497
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:568
Nearest PromoterID:NM_016520
Entrez ID:51759
Nearest Unigene:Hs.278429
Nearest Refseq:NM_016520
Nearest Ensembl:ENSG00000136819
Gene Name:
Gene Alias:CSU2|HCA59|HSPC220|bA409K20.3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):