rfhg_121850.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_121850.1
Species:human
Chr:chr10
Start:1049355
End:1049384
Strand:-
Source datasetsPRJNA615891
ProtocolSLIC_CAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2304992,EH38E1441656)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_134301.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • MP014955:81
  • AK303669:235
  • ENST00000381344.8:236
  • NM_004508.4:236
  • ENST00000491735.1:252
  • ENST00000482091.1:420
  • AK311110:440
  • NM_001317956.2:469
  • NM_001317957.2:469
  • BC107893:469
  • AK222875:469
  • X17025:470
  • ENST00000429642.2:472
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NR_134301
Entrez ID:3422
Nearest Unigene:Hs.283652
Nearest Refseq:NM_004508
Nearest Ensembl:ENSG00000067064
Gene Name:
Gene Alias:IPP1|IPPI1
Gene Type:protein-coding
CpG%:0.103448
GC%:0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):