rfhg_121864.1

Basic information about the TSS

TSS ID:	rfhg_121864.1
TSS ID(Version3):	hg_103443.1
Species:	human
Chr:	chr10

Start:	1159821
End:	1159844
Strand:	+

Source datasets

FANTOM5|PRJNA401781

Protocol

CAGE|RAMPAGE|oligo_capping

TSS cluster detected^*

4

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D2305108,EH38E1441737)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000666348.1:0 AK097673:0
GeneID:	399706
HGNC/MGI_ID:	HGNC:30974
UniProt_ID:
Nearer transcript ids and distances:	BC133040:-5 ENST00000647993.1:-9 ENST00000655745.1:-9 ENST00000652683.1:-10 ENST00000583117.1:-17 ENST00000425630.2:-53 NR_015376.2:-53 BC133038:-53 view more...

Gene_name:	long intergenic non-protein coding RNA 200
Gene_symbol:	LINC00200
Gene_synonyms:	FLJ40354
Gene_source:	HGNC:30974

TATA-Box annotation

Distance to TSS:	64
Nearest PromoterID:	NR_015376
Entrez ID:	399706
Nearest Unigene:	Hs.721191
Nearest Refseq:	NM_001010910
Nearest Ensembl:	ENSG00000229205
Gene Name:	long intergenic non-protein coding RNA 200
Gene Alias:	C10orf139\|NCRNA00200
Gene Type:	ncRNA
CpG%:	0.086957
GC%:	0.541667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.