rfhg_122053.1

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Basic information about the TSS


TSS ID:rfhg_122053.1
Species:human
Chr:chr10
Start:3785857
End:3785872
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2307403,EH38E1443158)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF330739:-63
MA566316:-63
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF330740:-172
  • MA566317:-172
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-583
Nearest PromoterID:NM_001160125
Entrez ID:1316
Nearest Unigene:Hs.4055
Nearest Refseq:NM_001300
Nearest Ensembl:ENSG00000067082
Gene Name:
Gene Alias:BCD1|CBA1|COPEB|CPBP|GBF|PAC1|ST12|ZF9
Gene Type:protein-coding
CpG%:0.133333
GC%:0.875000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):