rfhg_123173.1

Basic information about the TSS

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TSS ID: rfhg_123173.1 Species: human Chr: chr10		Start: 15860451 End: 15860529 Strand: -
Source datasets	PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673|PRJNA615891
Protocol	NETCAGE|CAGE|RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE
TSS cluster detected*	8

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2318474,EH38E1451157)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000477891.1:0 ENST00000277632.8:0 AK023459:0 AF176916:0 AL833873:0 BC067799:0 BC020605:0 BC061585:0 GeneID: 80013 HGNC/MGI_ID: HGNC:23578 UniProt_ID: Q9H8M7 Nearer transcript ids and distances: HQ447591:151 KJ894771:151 AB528976:151 CU688344:151 KJ903266:151 AB014761:152 CR457315:152 view more...

Gene_name: MINDY lysine 48 deubiquitinase 3 Gene_symbol: MINDY3 Gene_synonyms: CARP DERP5 FLJ13397 my042 Gene_source: HGNC:23578

TATA-Box annotation

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Distance to TSS:	17
Nearest PromoterID:	NM_024948
Entrez ID:	80013
Nearest Unigene:	Hs.158870
Nearest Refseq:	NM_024948
Nearest Ensembl:	ENSG00000148481
Gene Name:	MINDY lysine 48 deubiquitinase 3
Gene Alias:	C10orf97|CARP|DERP5|FAM188A|MST126|MSTP126|my042
Gene Type:	protein-coding
CpG%:	0.051282
GC%:	0.594937
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.