rfhg_123790.1

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Basic information about the TSS


TSS ID:rfhg_123790.1
Species:human
Chr:chr10
Start:23344741
End:23344752
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2324428,EH38E1455082)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ901088:-22
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000636213.3:-45
  • NM_001365862.2:-45
  • NM_001371909.1:-45
  • NM_001351306.2:-45
  • NM_153714.3:-45
  • ENST00000376501.7:47
  • ENST00000649478.1:63
  • ENST00000673651.1:-91
  • BC035732:-91
  • ENST00000323327.5:-93
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:51
Nearest PromoterID:NM_001365862
Entrez ID:256815
Nearest Unigene:Hs.132442
Nearest Refseq:NM_153714
Nearest Ensembl:ENSG00000179133
Gene Name:
Gene Alias:C10orf115|LINC01552
Gene Type:protein-coding
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):