rfhg_124595.1

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Basic information about the TSS


TSS ID:rfhg_124595.1
Species:human
Chr:chr10
Start:32955139
End:32955155
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2332151,EH38E1460524)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF375450:307
MA611027:307
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF375449:-390
  • MA611026:-390
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:2747
Nearest PromoterID:NM_133376
Entrez ID:3688
Nearest Unigene:Hs.643813
Nearest Refseq:NM_002211
Nearest Ensembl:ENSG00000150093
Gene Name:
Gene Alias:CD29|FNRB|GPIIA|MDF2|MSK12|VLA-BETA|VLAB
Gene Type:protein-coding
CpG%:0.062500
GC%:0.470588
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):