rfhg_12460.1

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Basic information about the TSS


TSS ID:rfhg_12460.1
Species:human
Chr:chr1
Start:151166548
End:151166562
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2221866,EH38E1384115)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF352488:17
MA588065:17
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF352485:-355
  • MA588062:-355
  • LF352484:-456
  • MA588061:-456
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:411
Nearest PromoterID:NM_001204856
Entrez ID:79005
Nearest Unigene:Hs.732060
Nearest Refseq:NM_024041
Nearest Ensembl:ENSG00000163156
Gene Name:
Gene Alias:-
Gene Type:protein-coding
CpG%:0.000000
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):