rfhg_125021.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_125021.1
Species:human
Chr:chr10
Start:44978803
End:44978816
Strand:-
Source datasetsPRJNA548673|PRJNA4843412|DRA013844
ProtocolReCappable-seq|NETCAGE|CAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2338920,EH38E1464916)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000298295.4:0
AB022718:0
AL136653:0
AK002191:0
AK098476:0
AK300839:0
AK312496:0
GeneID:11067
HGNC/MGI_ID:HGNC:23355
UniProt_ID:B4DUX8 Q9NTK1
Nearer transcript ids and distances:
  • AB025244:5
  • ENST00000496638.1:13
  • ENST00000448778.1:14
  • BC011402:40
view more...
Gene_name:DEPP autophagy regulator 1
Gene_symbol:DEPP1
Gene_synonyms:DEPP FIG Fseg
Gene_source:HGNC:23355



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_007021
Entrez ID:11067
Nearest Unigene:Hs.93675
Nearest Refseq:NM_007021
Nearest Ensembl:ENSG00000165507
Gene Name:DEPP autophagy regulator 1
Gene Alias:C10orf10|DEPP|FIG|Fseg
Gene Type:protein-coding
CpG%:0.000000
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.