rfhg_12515.1

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Basic information about the TSS


TSS ID:rfhg_12515.1
TSS ID(Version3):hg_5227.1
Species:human
Chr:chr1
Start:151399534
End:151399587
Strand:+
Source datasetsFANTOM5|EPD|DBTSS|ENCODE|PRJNA401781|PRJNA4843412
|PRJNA548673|PRJNA615891|DRA013844|PRJNA597322|PRJDB5282
ProtocolCAGE|TSS_database|TSS-seq|RAMPAGE|oligo_capping|NETCAGE
|ReCappable-seq|SLIC_CAGE|TIF-seq2|STRIPE-seq|C1CAGE
TSS cluster detected*15

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2222074,EH38E1384285)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000495288.5:0
ENST00000290541.7:0
ENST00000495805.5:0
ENST00000476467.1:0
AK313825:0
AK294149:0
D26600:0
HM005586:0
BC008314:0
BC010088:0
BC010098:0
BC011768:0
BC012168:0
BC017451:0
BC017486:0
BC000331:0
GeneID:5692
HGNC/MGI_ID:HGNC:9541
UniProt_ID:A0A140VK46 B4DFL3
Nearer transcript ids and distances:
  • AB464086:1
  • CR456820:1
  • CU675936:1
  • CU679615:1
  • CU680252:1
  • CU678915:1
  • BT006917:1
  • DQ890748:1
  • DQ892020:1
  • DQ895212:1
  • KJ905874:1
  • KJ905875:1
  • KJ905876:1
  • KJ897405:1
  • ENST00000493673.1:3
  • S71381:9
view more...
Gene_name:proteasome 20S subunit beta 4
Gene_symbol:PSMB4
Gene_synonyms:HN3 PROS26
Gene_source:HGNC:9541



TATA-Box annotation


Distance to TSS:-13
Nearest PromoterID:NM_002796
Entrez ID:5692
Nearest Unigene:Hs.89545
Nearest Refseq:NM_002796
Nearest Ensembl:ENSG00000159377
Gene Name:proteasome 20S subunit beta 4
Gene Alias:HN3|HsN3|PRAAS3|PROS-26|PROS26
Gene Type:protein-coding
CpG%:0.094340
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.