rfhg_125154.1

Basic information about the TSS

TSS ID:	rfhg_125154.1
Species:	human
Chr:	chr10

Start:	46911426
End:	46911462
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000417004.5:0 ENST00000395722.7:0 ENST00000374339.5:0 ENST00000374346.7:0 ENST00000395725.7:0 ENST00000374218.6:0 ENST00000395721.6:0 CR933668:0 AL050040:0 BC036539:0
GeneID:	26095
HGNC/MGI_ID:	HGNC:23423
UniProt_ID:	Q4JDK3 Q4JDL3 Q5H9Q9 Q5T1G4 Q9Y406
Nearer transcript ids and distances:	ENST00000374342.6:-30 BX648913:-30 NM_001042360.4:260 NM_001352546.2:260 NM_001352551.2:260 NM_001320690.2:260 NM_001352550.2:260 NM_001352539.2:260 NM_001320688.2:260 NM_001320691.2:260 NM_001352533.2:260 NM_001320686.2:260 NM_001042362.4:260 NM_001352524.2:260 NM_001042359.4:260 NM_001042361.5:260 NM_001042358.5:260 NM_001320689.2:260 NM_001320685.2:260 NM_001320684.2:260 NM_001320683.2:260 NR_148024.2:260 AY753191:260 ENST00000395727.6:319 ENST00000509900.5:319 ENST00000503851.5:319 ENST00000506080.5:319 ENST00000513266.5:319 ENST00000502705.5:319 ENST00000505814.5:319 ENST00000509774.5:319 ENST00000511769.5:319 ENST00000513159.5:319 ENST00000509599.5:319 ENST00000508715.5:319 ENST00000510335.5:319 ENST00000513156.5:319 AY704141:319 AY704142:319 AY704143:319 AY704144:319 AY704145:319 AY704147:319 AY704148:319 AY704150:319 AY704152:319 AY704153:319 AY704154:319 AY704156:319 AY704157:319 AY704158:319 view more...

Gene_name:	protein tyrosine phosphatase non-receptor type 20
Gene_symbol:	PTPN20
Gene_synonyms:	CT126 DKFZP566K0524 bA142I17.1 bA42B19.1
Gene_source:	HGNC:23423

TATA-Box annotation

Distance to TSS:	16
Nearest PromoterID:	NM_001352535
Entrez ID:	26095
Nearest Unigene:	Hs.440733
Nearest Refseq:	NM_015605
Nearest Ensembl:	ENSG00000204179
Gene Name:	protein tyrosine phosphatase non-receptor type 20
Gene Alias:	CT126\|PTPN20A\|PTPN20B\|bA142I17.1\|bA42B19.1
Gene Type:	protein-coding
CpG%:	0.055556
GC%:	0.702703
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000374342.6:-30 BX648913:-30 NM_001042360.4:260 NM_001352546.2:260 NM_001352551.2:260 NM_001320690.2:260 NM_001352550.2:260 NM_001352539.2:260 NM_001320688.2:260 NM_001320691.2:260 NM_001352533.2:260 NM_001320686.2:260 NM_001042362.4:260 NM_001352524.2:260 NM_001042359.4:260 NM_001042361.5:260 NM_001042358.5:260 NM_001320689.2:260 NM_001320685.2:260 NM_001320684.2:260 NM_001320683.2:260 NR_148024.2:260 AY753191:260 ENST00000395727.6:319 ENST00000509900.5:319 ENST00000503851.5:319 ENST00000506080.5:319 ENST00000513266.5:319 ENST00000502705.5:319 ENST00000505814.5:319 ENST00000509774.5:319 ENST00000511769.5:319 ENST00000513159.5:319 ENST00000509599.5:319 ENST00000508715.5:319 ENST00000510335.5:319 ENST00000513156.5:319 AY704141:319 AY704142:319 AY704143:319 AY704144:319 AY704145:319 AY704147:319 AY704148:319 AY704150:319 AY704152:319 AY704153:319 AY704154:319 AY704156:319 AY704157:319 AY704158:319" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.