rfhg_125178.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_125178.1
Species:human
Chr:chr10
Start:47384272
End:47384331
Strand:-
Source datasetsPRJNA548673
ProtocolCAGE|ReCappable-seq
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2340573,EH38E1465935)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000585316.3:0
BC051323:0
AK056666:0
GeneID:118738
HGNC/MGI_ID:HGNC:23535
UniProt_ID:Q96MN9
Nearer transcript ids and distances:
  • LP895782:-7
  • ENST00000591025.1:11
  • BC026895:11
view more...
Gene_name:zinc finger protein 488
Gene_symbol:ZNF488
Gene_synonyms:FLJ32104
Gene_source:HGNC:23535



TATA-Box annotation


Distance to TSS:-8
Nearest PromoterID:NM_001346933
Entrez ID:118738
Nearest Unigene:Hs.27788
Nearest Refseq:NM_153034
Nearest Ensembl:ENSG00000265763
Gene Name:zinc finger protein 488
Gene Alias:-
Gene Type:protein-coding
CpG%:0.101695
GC%:0.733333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.