rfhg_125317.1

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Basic information about the TSS


TSS ID:rfhg_125317.1
Species:human
Chr:chr10
Start:49396076
End:49396096
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2342066,EH38E1466871)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000374139.8:0
GeneID:644168
HGNC/MGI_ID:HGNC:21536
UniProt_ID:A6NNA5
Nearer transcript ids and distances:
    Gene_name:dorsal root ganglia homeobox
    Gene_symbol:DRGX
    Gene_synonyms:DRG11
    Gene_source:HGNC:21536



    TATA-Box annotation


    Distance to TSS:3
    Nearest PromoterID:NM_001276451
    Entrez ID:644168
    Nearest Unigene:Hs.534530
    Nearest Refseq:NM_001080520
    Nearest Ensembl:ENSG00000165606
    Gene Name:dorsal root ganglia homeobox
    Gene Alias:DRG11|PRRXL1
    Gene Type:protein-coding
    CpG%:0.150000
    GC%:0.714286
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.