rfhg_126506.1

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Basic information about the TSS


TSS ID:rfhg_126506.1
Species:human
Chr:chr10
Start:70816748
End:70816760
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2357244,EH38E1476244)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF322576:50
MA558153:50
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB384155:94
  • KJ897928:94
  • AF144638:94
  • LF322577:-348
  • MA558154:-348
  • AK314615:-364
  • LF322578:-420
  • MA558155:-420
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:806
Nearest PromoterID:NM_003901
Entrez ID:8879
Nearest Unigene:Hs.499984
Nearest Refseq:NM_003901
Nearest Ensembl:ENSG00000166224
Gene Name:
Gene Alias:NPHS14|S1PL|SPL
Gene Type:protein-coding
CpG%:0.083333
GC%:0.769231
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):