rfhg_12660.1

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Basic information about the TSS


TSS ID:rfhg_12660.1
Species:human
Chr:chr1
Start:151994032
End:151994042
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2222682,EH38E1384792)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK125884:489
GeneID:441908
HGNC/MGI_ID:HGNC:31998
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:NBPF member 18, pseudogene
    Gene_symbol:NBPF18P
    Gene_synonyms:
    Gene_source:HGNC:31998



    TATA-Box annotation


    Distance to TSS:-178
    Nearest PromoterID:NM_002966
    Entrez ID:6281
    Nearest Unigene:Hs.143873
    Nearest Refseq:NM_002966
    Nearest Ensembl:ENSG00000197747
    Gene Name:NBPF member 18, pseudogene
    Gene Alias:42C|ANX2L|ANX2LG|CAL1L|CLP11|Ca[1]|GP11|P11|p10
    Gene Type:protein-coding
    CpG%:0.100000
    GC%:0.454545
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.