rfhg_127008.1

Basic information about the TSS

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TSS ID: rfhg_127008.1 TSS ID(Version3): hg_105573.1 hg_105574.1 Species: human Chr: chr10		Start: 73998084 End: 73998348 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|RAMPAGE|PRJNA401781 |PRJNA615891|PRJNA548673|PRJNA4843412|DRA013844|PRJDB5282 |PRJNA597322
Protocol	CAGE|TSS_database|RAMPAGE|SLIC_CAGE|ReCappable-seq|TIF-seq2 |NETCAGE|C1CAGE|STRIPE-seq|oligo_capping
TSS cluster detected*	16

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	-
Category:	-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000624354.3:0 ENST00000372755.7:0 ENST00000478896.2:0 ENST00000211998.10:0 AK304823:0 EU794673:0 AK300280:0 AK296509:0 BC039174:0 GQ900900:0 M33308:0 AB385172:0 DQ894680:0 GeneID: 7414 HGNC/MGI_ID: HGNC:12665 UniProt_ID: A0A024QZN4 A0A096LPE1 A0A384NYN5 B4DKC9 B4DTM7 B4E3Q9 V9HWK2 Nearer transcript ids and distances: LF209953:-20 MA445530:-20 view more...

Gene_name: vinculin Gene_symbol: VCL Gene_synonyms: Gene_source: HGNC:12665

TATA-Box annotation

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Distance to TSS:	100
Nearest PromoterID:	NM_003373
Entrez ID:	7414
Nearest Unigene:	Hs.643896
Nearest Refseq:	NM_003373
Nearest Ensembl:	ENSG00000035403
Gene Name:	vinculin
Gene Alias:	CMD1W|CMH15|HEL114|MV|MVCL
Gene Type:	protein-coding
CpG%:	0.121212
GC%:	0.667925
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.