rfhg_128534.1

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Basic information about the TSS


TSS ID:rfhg_128534.1
Species:human
Chr:chr10
Start:93600755
End:93600766
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2376716,EH38E1489568)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213445:15
MA449022:15
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • DQ891381:-262
  • CU676592:-262
  • KJ897458:-262
  • KR711247:-262
  • KR711248:-262
  • DQ894558:-262
  • AB527944:-262
  • X00129:-437
  • ENST00000371464.8:-469
  • NM_006744.4:-469
  • BC020633:-470
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:475
Nearest PromoterID:NM_006744
Entrez ID:5950
Nearest Unigene:Hs.50223
Nearest Refseq:NM_006744
Nearest Ensembl:ENSG00000138207
Gene Name:
Gene Alias:MCOPCB10|RDCCAS
Gene Type:protein-coding
CpG%:0.090909
GC%:0.750000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):