rfhg_129608.1

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Basic information about the TSS


TSS ID:rfhg_129608.1
TSS ID(Version3):hg_106725.1
Species:human
Chr:chr10
Start:102461381
End:102461432
Strand:+
Source datasetsFANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA401781|PRJNA548673
|PRJNA615891
ProtocolCAGE|TSS_database|NETCAGE|ReCappable-seq|SLIC_CAGE|RAMPAGE
|oligo_capping
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2384361,EH38E1495059)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000238936.8:0
ENST00000369931.3:0
AK296583:0
AK301612:0
AY358808:0
GeneID:79847
HGNC/MGI_ID:HGNC:26196
UniProt_ID:B4DKJ1 B4DWN6 Q14CX5 Q6UWF4
Nearer transcript ids and distances:
    Gene_name:major facilitator superfamily domain containing 13A
    Gene_symbol:MFSD13A
    Gene_synonyms:FLJ22529 bA18I14.8
    Gene_source:HGNC:26196



    TATA-Box annotation


    Distance to TSS:11
    Nearest PromoterID:NM_024789
    Entrez ID:79847
    Nearest Unigene:Hs.309069
    Nearest Refseq:NM_024789
    Nearest Ensembl:ENSG00000138111
    Gene Name:major facilitator superfamily domain containing 13A
    Gene Alias:C10orf77|TMEM180|bA18I14.8
    Gene Type:protein-coding
    CpG%:0.117647
    GC%:0.711538
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.