rfhg_130780.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_130780.1
Species:human
Chr:chr10
Start:118241549
End:118241574
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2397417,EH38E1503596)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000658345.1:0
ENST00000413810.2:0
GeneID:101927760
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000652828.1:-54
  • ENST00000436975.6:-67
  • ENST00000669733.1:-72
  • ENST00000653445.1:-76
  • ENST00000436430.1:78
  • ENST00000671611.1:80
  • ENST00000655184.1:-81
  • ENST00000431695.6:-81
view more...
Gene_name:long intergenic non-protein coding RNA 2944
Gene_symbol:LINC02944
Gene_synonyms:
Gene_source:EntrezGene:101927760



TATA-Box annotation


Distance to TSS:100763
Nearest PromoterID:NM_001134672
Entrez ID:63877
Nearest Unigene:Hs.105575
Nearest Refseq:NM_022063
Nearest Ensembl:ENSG00000165669
Gene Name:long intergenic non-protein coding RNA 2944
Gene Alias:C10orf84|bA319I23.1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.346154
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.