rfhg_130867.1

Basic information about the TSS

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TSS ID: rfhg_130867.1 TSS ID(Version3): hg_111682.1 Species: human Chr: chr10		Start: 119178772 End: 119178835 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|ENCODE|RAMPAGE|PRJDB5282|PRJNA615891 |PRJNA548673|PRJNA401781|PRJNA597322|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|RAMPAGE|C1CAGE|TIF-seq2|ReCappable-seq |SLIC_CAGE|oligo_capping|STRIPE-seq|NETCAGE
TSS cluster detected*	16

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2398239,EH38E1504168)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000298510.4:0 BC022373:0 BC059169:0 BC021691:0 BC007062:0 BC002685:0 GQ891458:0 BC008435:0 BC111397:0 AK130897:0 BC009601:0 D49396:0 AK222659:0 BT020007:0 AK313169:0 AB527495:0 CR450344:0 CU678120:0 GeneID: 10935 HGNC/MGI_ID: HGNC:9354 UniProt_ID: A0A384MTR2 Q53HC2 Nearer transcript ids and distances: EF036492:7

Gene_name: peroxiredoxin 3 Gene_symbol: PRDX3 Gene_synonyms: AOP-1 MER5 SP-22 Gene_source: HGNC:9354

TATA-Box annotation

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Distance to TSS:	9
Nearest PromoterID:	NR_126105
Entrez ID:	10935
Nearest Unigene:	Hs.523302
Nearest Refseq:	NM_006793
Nearest Ensembl:	ENSG00000165672
Gene Name:	peroxiredoxin 3
Gene Alias:	AOP-1|AOP1|HBC189|MER5|PRO1748|SP-22|prx-III
Gene Type:	protein-coding
CpG%:	0.095238
GC%:	0.718750
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.