rfhg_131048.1

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Basic information about the TSS


TSS ID:rfhg_131048.1
Species:human
Chr:chr10
Start:121928082
End:121928086
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2400781,EH38E1505981)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000437593.1:226
GeneID:100130887
HGNC/MGI_ID:HGNC:49496
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:ATE1 opposite strand, pseudogene
    Gene_symbol:ATE1OSP
    Gene_synonyms:ENST00000437593
    Gene_source:HGNC:49496



    TATA-Box annotation


    Distance to TSS:-21
    Nearest PromoterID:NM_001001976
    Entrez ID:11101
    Nearest Unigene:Hs.632080
    Nearest Refseq:NM_007041
    Nearest Ensembl:ENSG00000107669
    Gene Name:ATE1 opposite strand, pseudogene
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.250000
    GC%:1.000000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.