rfhg_132302.1

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Basic information about the TSS


TSS ID:rfhg_132302.1
Species:human
Chr:chr11
Start:824587
End:824607
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2413218,EH38E1513994)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000528982.1:-38
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • CU677898:-254
  • X56789:-459
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-3322
Nearest PromoterID:NM_001286606
Entrez ID:283229
Nearest Unigene:Hs.660936
Nearest Refseq:NM_173584
Nearest Ensembl:ENSG00000177685
Gene Name:
Gene Alias:EFCAB4A
Gene Type:protein-coding
CpG%:0.000000
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):