rfhg_133009.1

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Basic information about the TSS


TSS ID:rfhg_133009.1
Species:human
Chr:chr11
Start:1997646
End:1997656
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF370717:57
MA606294:57
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF370719:-71
  • MA606296:-71
  • BC040852:-105
  • BC040073:-122
  • BC115700:143
  • ENST00000412788.5:-158
  • BC053636:172
  • BC110657:172
  • LF370715:177
  • MA606292:177
  • ENST00000439725.5:186
  • AK056774:-186
  • AK092486:-186
  • AK311497:-186
  • AK309887:-186
  • LF207984:-189
  • MA443561:-189
  • ENST00000414790.6:-219
  • ENST00000643292.1:-219
  • NR_002196.2:-219
  • NR_131223.1:-219
  • BC015952:289
  • LF370714:331
  • MA606291:331
  • BC069247:383
  • LF370712:400
  • MA606289:400
  • BC063564:409
  • BC098439:411
  • ENST00000411861.5:429
  • BC063626:429
  • BC023213:459
  • BC053637:487
  • LF370711:497
  • MA606288:497
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:224
Nearest PromoterID:NR_002196
Entrez ID:283120
Nearest Unigene:Hs.533566
Nearest Refseq:NR_002196
Nearest Ensembl:ENSG00000130600
Gene Name:
Gene Alias:ASM|ASM1|BWS|D11S813E|LINC00008|MIR675HG|NCRNA00008|WT2
Gene Type:ncRNA
CpG%:0.000000
GC%:0.818182
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "LF370719:-71 MA606296:-71 BC040852:-105 BC040073:-122 BC115700:143 ENST00000412788.5:-158 BC053636:172 BC110657:172 LF370715:177 MA606292:177 ENST00000439725.5:186 AK056774:-186 AK092486:-186 AK311497:-186 AK309887:-186 LF207984:-189 MA443561:-189 ENST00000414790.6:-219 ENST00000643292.1:-219 NR_002196.2:-219 NR_131223.1:-219 BC015952:289 LF370714:331 MA606291:331 BC069247:383 LF370712:400 MA606289:400 BC063564:409 BC098439:411 ENST00000411861.5:429 BC063626:429 BC023213:459 BC053637:487 LF370711:497 MA606288:497" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.